## JSON code of the network

{"nodes":["r","a","b","c","d","e","f","g","h","i","j","1","2","3","4"],"edges": [["r","a"],["a","b"],["b","c"],["c","d"],["d","1"],["c","e"],["e","f"],["f","d"],["f","2"],["b","e"],["a","g"],["g","3"],["r","h"],["h","i"],["i","g"],["i","j"],["h","j"],["j","4"]]}

## Visualization of the network

*r* is the root and the leaves are labeled from 1 to 4.
Arcs are oriented from the parent to the child.

## Classes containing this network or not

### Classes which contain this network (with direct proof)

- binary genetically stable: All reticulation vertices are stable (
*e* for leaf 2, *d* for leaf 1, *g* for leaf 3, *j* for leaf 4) and all have at least one parent which is stable (*f*, parent of *d*, stable for leaf 2; *b*, parent of *e*, stable for leaves 1 and 2; *a*, parent of *g*, stable for leaves 1 and 2; *h*, parent of *j*, stable for leaf 4) - binary nearly stable: All vertices except
*c* and *i* (whose unique parent is in both cases stable) are stable. - binary level-2: Easy to check.
- binary leaf outerplanar: Easy to check.
- binary FU-stable: Easy to check.

### Classes which do not contain this network (with direct proof)

### All classes

In the inclusion diagram below, the names of classes containing this network are colored green and the name of the classes not containing it are colored red.

## About this website

This website was programmed and is maintained by Philippe Gambette.
It was started during the internship of Maxime Morgado at LIGM, in June-July 2015,
and also contains contributions made from Narges Tavassoli from November 2016 to January 2017.

Please contact Philippe Gambette if you have any suggestions about this website, especially about problems, properties, results or subclasses to add.

### How to cite

P. Gambette, M. Morgado, N. Tavassoli & M. Weller (2018)

*ISIPhyNC, an Information System on Inclusions of Phylogenetic Network Classes*, manuscript in preparation.

### Database content

73 classes of phylogenetic networks including 35 classes of binary phylogenetic networks (defined in a total of 20 bibliographic references), 51 inclusion relationships proved directly between classes (including some found in a total of 9 bibliographic references), 24 networks (68 memberships to a class, 56 non-memberships to a class), 3 problems considered, 3 properties considered, 37 theorems proved directly (including some found in a total of 17 bibliographic references) including 26 positive results (which can be extended to subclasses) and 11 negative results (which can be extended to superclasses).