Who is Who in Phylogenetic Networks

Publications of Cécile Ané     Order by:   Type | Year

Associated keywords

ancestral-trait-reconstruction explicit-network from-network from-quartets from-sequences from-trees from-unrooted-trees likelihood phylogenetic-network phylogeny Program-PhyloNetwork Program-PhyloNetworks-SNaQ reconstruction semidirected-network software statistical-model statistical-test survey

2019

1 Christopher Blair and Cécile Ané. Phylogenetic trees and networks can serve as powerful and complementary approaches for analysis of genomic data. In SB, Vol. 69(3):593-601, 2019. Keywords: likelihood, phylogenetic network, phylogeny, Program PhyloNetwork, Program PhyloNetworks SNaQ, survey.

2018

2 Paul Bastide, Claudia Solís-Lemus, Ricardo Kriebel, Kenneth William Sparks and Cécile Ané. Phylogenetic Comparative Methods on Phylogenetic Networks with Reticulations. In SB, Vol. 67(5):800-820, 2018. Keywords: ancestral trait reconstruction, from network, likelihood, Program PhyloNetworks SNaQ, software, statistical model, statistical test. Note: https://doi.org/10.1101/194050.

2017

3 Claudia Solís-Lemus, Paul Bastide and Cécile Ané. PhyloNetworks: A Package for Phylogenetic Networks. In MBE, Vol. 34(12):3292-3298, 2017. Keywords: from sequences, from trees, likelihood, phylogenetic network, phylogeny, Program PhyloNetworks SNaQ, reconstruction, software. Note: https://doi.org/10.1093/molbev/msx235.         4 Cécile Ané. From reconstructing to using phylogenetic networks. Phyloseminar #72, 2017. Keywords: explicit network, from sequences, likelihood, phylogenetic network, phylogeny, Program PhyloNetworks SNaQ, reconstruction, semidirected network. Note: https://www.youtube.com/watch?v=PF4j_JOQP0c.

2016

5 Claudia Solís-Lemus and Cécile Ané. Inferring phylogenetic networks with maximum pseudolikelihood under incomplete lineage sorting. In PLOS Genetics, Vol. 12(3):e1005896, 2016. Keywords: explicit network, from quartets, from unrooted trees, likelihood, phylogenetic network, phylogeny, Program PhyloNetworks SNaQ. Note: http://arxiv.org/abs/1509.06075v1.