Who is Who in Phylogenetic Networks

Publications of Andrew R. Francis     Order by:   Type | Year

Associated keywords

bound characterization distance-between-networks explicit-network from-distances from-network from-unrooted-trees NNI-distance NNI-moves normal-network NP-complete phylogenetic-network phylogeny polynomial Program-PhyloSketch reconstruction SPR-distance TBR-distance time-consistent-network tree-containment tree-based-network tree-child-network uniqueness unrooted-tree-based-network

2020

1 Andrew R. Francis, Daniel H. Huson and Mike Steel. Normalising phylogenetic networks. 2020. Keywords: explicit network, from network, normal network, phylogenetic network, phylogeny, polynomial, Program PhyloSketch, reconstruction, tree-child network. Note: https://arxiv.org/abs/2008.07797.

2018

2 Andrew R. Francis, Charles Semple and Mike Steel. New characterisations of tree-based networks and proximity measures. In Advances in Applied Mathematics, Vol. 93:93-107, 2018. Keywords: characterization, explicit network, phylogenetic network, phylogeny, time consistent network, tree-based network. Note: https://arxiv.org/abs/1611.04225.         3 Andrew R. Francis, Katharina Huber, Vincent Moulton and Taoyang Wu. Bounds for phylogenetic network space metrics. In JOMB, Vol. 76(5):1229-1248, 2018. Keywords: bound, distance between networks, from network, NNI distance, NNI moves, phylogenetic network, phylogeny, SPR distance, TBR distance. Note: https://arxiv.org/abs/1702.05609.         4 Andrew R. Francis, Katharina Huber and Vincent Moulton. Tree-based unrooted phylogenetic networks. In BMB, Vol. 80(2):404-416, 2018. Keywords: characterization, explicit network, NP complete, phylogenetic network, phylogeny, tree containment, tree-based network, unrooted tree-based network. Note: https://arxiv.org/abs/1704.02062.         5 Andrew R. Francis and Vincent Moulton. Identifiability of tree-child phylogenetic networks under a probabilistic recombination-mutation model of evolution. In JTB, Vol. 446:160-167, 2018. Keywords: explicit network, from unrooted trees, phylogenetic network, phylogeny, tree-child network, uniqueness. Note: https://arxiv.org/abs/1712.04223.

2015

6 Andrew R. Francis and Mike Steel. Tree-like Reticulation Networks - When Do Tree-like Distances Also Support Reticulate Evolution? In MBIO, Vol. 259:12-19, 2015. Keywords: from distances, phylogenetic network, phylogeny. Note: http://arxiv.org/abs/1405.2965.         7 Andrew R. Francis and Mike Steel. Which phylogenetic networks are merely trees with additional arcs? In Systematic Biology, Vol. 64(5):768-777, 2015. Keywords: explicit network, phylogenetic network, phylogeny, polynomial, tree-based network. Note: http://arxiv.org/abs/1502.07045.