Who is Who in Phylogenetic Networks

Publications related to 'Program Serial NetEvolve' : Serial NetEvolve is a modification of the Treevolve program in which serially sampled sequences are evolved along a randomly generated coalescent tree or network http://biorg.cis.fiu.edu/SNE/   Order by:   Type | Year

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generation phylogenetic-network phylogeny Program-Serial-NetEvolve Program-Treevolve recombination software

2006

1 Patricia Buendia and Giri Narasimhan. Serial NetEvolve: A flexible utility for generating serially-sampled sequences along a tree or recombinant network. In BIO, Vol. 18(22):2313-2314, 2006. Keywords: generation, phylogenetic network, phylogeny, Program Serial NetEvolve, Program Treevolve, recombination, software. Note: http://dx.doi.org/10.1093/bioinformatics/btl387.         Toggle abstract "Summary: Serial NetEvolve is a flexible simulation program that generates DNA sequences evolved along a tree or recombinant network. It offers a user-friendly Windows graphical interface and a Windows or Linux simulator with a diverse selection of parameters to control the evolutionary model. Serial NetEvolve is a modification of the Treevolve program with the following additional features: simulation of serially-sampled data, the choice of either a clock-like or a variable rate model of sequence evolution, sampling from the internal nodes and the output of the randomly generated tree or network in our newly proposed NeTwick format. © 2006 Oxford University Press."