Bereg Publications of Sergey Bereg     Order by:   Type | Year
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2012
1
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Paul Phipps and Sergey Bereg. Optimizing Phylogenetic Networks for Circular Split Systems. In TCBB, Vol. 9(2):535-547, 2012.  
Keywords: abstract network, from distances, from splits, phylogenetic network, phylogeny, Program PhippsNetwork, reconstruction, software.
       
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2
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Ruogu Sheng and Sergey Bereg. Approximating Metrics with Planar Boundary-Labeled Phylogenetic Networks. In JBCB, Vol. 10(6):1250017, 2012.  
Keywords: abstract network, from distances, phylogenetic network, phylogeny, reconstruction.
       
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2009
3
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Lichen Bao and Sergey Bereg. Counting Faces in Split Networks. In ISBRA09, Vol. 5251:284-295 of LNCS, 2009.  
Note: http://dx.doi.org/10.1007/978-3-642-01551-9_12.
       
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4
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Poornima Venugopal and Sergey Bereg. Layout of Phylogenetic Networks and Multi-Labeled Trees. In BIOT'09, Pages 91, 2009.  
Keywords: explicit network, phylogenetic network, phylogeny, Program PADRE, visualization.
Note: http://www.biotconf.org/PDFs/1456.pdf.
       

2008
5
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Lichen Bao and Sergey Bereg. Clustered SplitsNetworks. In COCOA08, Vol. 5165:469-478 of LNCS, springer, 2008.  
Keywords: abstract network, from distances, NeighborNet, realization, reconstruction.
Note: http://dx.doi.org/10.1007/978-3-540-85097-7_44, slides available at http://www.utdallas.edu/~besp/cocoa08talk.pdf.
       
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2007
6
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Yuanyi Zhang, Lichen Bao and Sergey Bereg. Optimizing Split Networks. 2007.  
Note: UC Dallas Computer Science Technical Report UTDCS-08-07.
       

2006
7
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Sergey Bereg and Yuanyi Zhang. Phylogenetic Networks Based on the Molecular Clock Hypothesis. In TCBB, Vol. 3(4), 2006.  
Note: http://www.utdallas.edu/~yzhang/Homepage/Papers/prep-tcbb.pdf.
       
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2005
8
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Sergey Bereg and Kathryn Bean. Constructing Phylogenetic Networks from Trees. In BIBE05, Pages 299-305, 2005. 1 comment  
Keywords: evaluation, from distances, phylogenetic network, phylogeny, Program SplitsTree, Program T REX, reconstruction, split, split network.
Note: http://dx.doi.org/10.1109/BIBE.2005.19.
       
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9
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Sergey Bereg and Yuanyi Zhang. Phylogenetic Networks Based on the Molecular Clock Hypothesis. In BIBE05, Pages 320-323, 2005.  
Note: http://dx.doi.org/10.1109/BIBE.2005.46.
       
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