Who is Who in Phylogenetic Networks

Publications of Pierre Legendre     Order by:   Type | Year

Associated keywords

abstract-network explicit-network from-distances hybridization lateral-gene-transfer median-network NeighborNet netting phylogenetic-network phylogeny Program-Arlequin Program-Network Program-Pyramids Program-Reticlad Program-SplitsTree Program-T-REX Program-TCS Program-WeakHierarchies pyramid reconstruction reticulogram split split-decomposition split-network survey weak-hierarchy

2014

1 Vladimir Makarenkov, Alix Boc and Pierre Legendre. A New Algorithm for Inferring Hybridization Events Based on the Detection of Horizontal Gene Transfers. In Fuad Aleskerov, Boris Goldengorin and Panos M. Pardalos editors, Clusters, Orders, and Trees: Methods and Applications, Vol. 92 of Springer Optimization and Its Applications, Springer, 2014. Keywords: explicit network, phylogenetic network, phylogeny, reconstruction.

2006

2 Vladimir Makarenkov, Dmytro Kevorkov and Pierre Legendre. Phylogenetic Network Construction Approaches. In Applied Mycology and Biotechnology, Vol. 6:61-97, 2006. Keywords: from distances, hybridization, lateral gene transfer, median network, NeighborNet, netting, Program Arlequin, Program Network, Program Pyramids, Program Reticlad, Program SplitsTree, Program T REX, Program TCS, Program WeakHierarchies, pyramid, reticulogram, split, split decomposition, split network, survey, weak hierarchy. Note: http://www.labunix.uqam.ca/~makarenv/makarenv/MKL_article.pdf.

2004

3 Vladimir Makarenkov, Pierre Legendre and Yves Desdevises. Modeling phylogenetic relationships using reticulated networks. In Zoologica Scripta, Vol. 33(1):89-96, 2004. Note: http://www.labunix.uqam.ca/~makarenv/articles/ZoologicaScripta.pdf.         4 Vladimir Makarenkov and Pierre Legendre. From a phylogenetic tree to a reticulated network. In JCB, Vol. 11(1):195-212, 2004. Keywords: abstract network, from distances, phylogenetic network, phylogeny, Program T REX, reticulogram. Note: http://www.labunix.uqam.ca/~makarenv/makarenv/article_JCB2004.pdf.

2002

5 Pierre Legendre and Vladimir Makarenkov. Reconstruction of biogeographic and evolutionary networks using reticulograms. In Systematic Biology, Vol. 51(2):199-216, 2002. Keywords: phylogenetic network, phylogeny, reconstruction, reticulogram. Note: http://www.labunix.uqam.ca/~makarenv/makarenv/Article_SB.pdf.

2000

6 Pierre Legendre. Biological Applications of Reticulate Analysis. In JCLA, Vol. 17:191-195, 2000. Note: http://www.bio.umontreal.ca/legendre/reprints/Special_Section.pdf.         7 Pierre Legendre. Reticulate evolution: From bacteria to philosophers. In JCLA, Vol. 17:153-157, 2000. Note: http://www.bio.umontreal.ca/legendre/reprints/Special_Section.pdf.         8 Pierre Legendre and Vladimir Makarenkov. Improving the additive tree representation of a dissimilarity matrix using reticulations. In IFCS00, Pages 35-40, springer, 2000. Keywords: phylogenetic network, phylogeny, reconstruction, reticulogram. Note: http://www.info2.uqam.ca/~makarenv/makarenv/Article_IFCS.pdf.