Rosselló Publications of Francesc Rosselló     Order by:   Type | Year
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2015
1
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Gabriel Cardona, Joan Carles Pons and Francesc Rosselló. A reconstruction problem for a class of phylogenetic networks with lateral gene transfers. In ALMOB, Vol. 10(28):1-15, 2015.
Keywords: explicit network, from rooted trees, lateral gene transfer, phylogenetic network, phylogeny, Program LGTnetwork, reconstruction, software, tree-based network.
Note: http://dx.doi.org/10.1186/s13015-015-0059-z.
       

2014
2
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Gabriel Cardona, Mercè Llabrés, Francesc Rosselló and Gabriel Valiente. The comparison of tree-sibling time consistent phylogenetic networks is graph-isomorphism complete. In The Scientific World Journal, Vol. 2014(254279):1-6, 2014.
Keywords: abstract network, distance between networks, from network, isomorphism, phylogenetic network, tree sibling network.
Note: http://arxiv.org/abs/0902.4640.
       
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Adrià Alcalà Mena, Mercè Llabrés, Francesc Rosselló and Pau Rullan. Tree-Child Cluster Networks. In Fundamenta Informaticae, Vol. 134(1-2):1-15, 2014.
Keywords: explicit network, from clusters, phylogenetic network, phylogeny, Program PhyloNetwork, reconstruction, tree-child network.
       

2012
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Adrià Alcalà Mena and Francesc Rosselló. Ternary graph isomorphism in polynomial time, after Luks. 2012.
Keywords: distance between networks, explicit network, from network, isomorphism, phylogenetic network, phylogeny, polynomial, Program SAGE.
Note: http://arxiv.org/abs/1209.0871.
       

2011
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Gabriel Cardona, Mercè Llabrés, Francesc Rosselló and Gabriel Valiente. Comparison of Galled Trees. In TCBB, Vol. 8(2):410-427, 2011.
Note: http://arxiv.org/abs/0906.1166.
       
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2010
6
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Gabriel Cardona, Mercè Llabrés, Francesc Rosselló and Gabriel Valiente. Path lengths in tree-child time consistent hybridization networks. In Information Sciences, Vol. 180(3):366-383, 2010.
Keywords: distance between networks, phylogenetic network, phylogeny, time consistent network, tree-child network.
Note: http://arxiv.org/abs/0807.0087?context=cs.CE.
       
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Gabriel Cardona, Mercè Llabrés and Francesc Rosselló. A metric for galled networks. 2010.
Keywords: distance between networks, explicit network, from network, galled network, phylogenetic network, phylogeny.
Note: http://arxiv4.library.cornell.edu/abs/1009.0652.
       

8
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Gabriel Cardona, Mercè Llabrés and Francesc Rosselló. Two Results on Distances for Phylogenetic Networks. In Advances in Intelligent and Soft Computing, Vol. 74:93-100, 2010.
Keywords: distance between networks, explicit network, phylogenetic network, phylogeny, tree sibling network.
Note: http://www.merilibrary.com/books/bioinformatics/advances%20in%20bioinformatics.pdf#page=103.
       

2009
9
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Gabriel Cardona, Francesc Rosselló and Gabriel Valiente. Comparison of tree-child phylogenetic networks. In TCBB, Vol. 6(4):552-569, 2009.
Keywords: explicit network, phylogenetic network, phylogeny, Program Bio PhyloNetwork, Program PhyloNetwork, tree sibling network, tree-child network.
Note: http://arxiv.org/abs/0708.3499.
       
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10
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Gabriel Cardona, Mercè Llabrés, Francesc Rosselló and Gabriel Valiente. Metrics for phylogenetic networks I: Generalizations of the Robinson-Foulds metric. In TCBB, Vol. 6(1):46-61, 2009.
Keywords: distance between networks, explicit network, phylogenetic network, phylogeny, time consistent network, tree-child network, tripartition distance.
Note: http://dx.doi.org/10.1109/TCBB.2008.70.
       
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11
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Gabriel Cardona, Mercè Llabrés, Francesc Rosselló and Gabriel Valiente. Metrics for phylogenetic networks II: Nodal and triplets metrics. In TCBB, Vol. 6(3):454-469, 2009.
Keywords: distance between networks, phylogenetic network, phylogeny.
Note: http://dx.doi.org/10.1109/TCBB.2008.127.
       
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Gabriel Cardona, Mercè Llabrés, Francesc Rosselló and Gabriel Valiente. On Nakhleh's metric for reduced phylogenetic networks. In TCBB, Vol. 6(4):629-638, 2009.
Keywords: distance between networks, phylogenetic network, phylogeny.
Note: Preliminary versions: http://arxiv.org/abs/0809.0110 and http://arxiv.org/abs/0801.2354v1.
       
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13
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Francesc Rosselló and Gabriel Valiente. All that Glisters is not Galled. In MBIO, Vol. 221(1):54-59, 2009.
Keywords: galled tree, phylogenetic network, phylogeny.
Note: http://arxiv.org/abs/0904.2448.
       
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2008
14
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Gabriel Cardona, Francesc Rosselló and Gabriel Valiente. Tripartitions do not always discriminate phylogenetic networks. In MBIO, Vol. 211(2):356-370, 2008.
Keywords: distance between networks, phylogenetic network, phylogeny, Program Bio PhyloNetwork, tree-child network, tripartition distance.
Note: http://arxiv.org/abs/0707.2376, slides available at http://www.newton.cam.ac.uk/webseminars/pg+ws/2007/plg/plgw01/0904/valiente/.
       
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15
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Gabriel Cardona, Francesc Rosselló and Gabriel Valiente. A Perl Package and an Alignment Tool for Phylogenetic Networks. In BMCB, Vol. 9:175, 2008.
Keywords: distance between networks, phylogenetic network, phylogeny, Program Bio PhyloNetwork, tree sibling network, tree-child network.
Note: http://dx.doi.org/10.1186/1471-2105-9-175.
       
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16
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Gabriel Cardona, Mercè Llabrés, Francesc Rosselló and Gabriel Valiente. A Distance Metric for a Class of Tree-Sibling Phylogenetic Networks. In BIO, Vol. 24(13):1481-1488, 2008.
Keywords: distance between networks, phylogenetic network, phylogeny, polynomial, tree sibling network.
Note: http://dx.doi.org/10.1093/bioinformatics/btn231.
       
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Gabriel Cardona, Mercè Llabrés, Francesc Rosselló and Gabriel Valiente. Phylogenetic Networks: Justification, Models, Distances and Algorithms. In VI Jornadas de Matemática Discreta y Algorítmica (JMDA'08), 2008.
Keywords: distance between networks, mu distance, phylogenetic network, phylogeny, polynomial, survey, time consistent network, tree-child network, tripartition distance, triplet distance.
Note: http://bioinfo.uib.es/media/uploaded/jmda2008_submission_61-1.pdf.
       

18
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Gabriel Cardona, Francesc Rosselló and Gabriel Valiente. Extended Newick: It is Time for a Standard Representation. In BMCB, Vol. 9:532, 2008.
Keywords: evaluation, explicit network, phylogenetic network, Program Bio PhyloNetwork, Program Dendroscope, Program NetGen, Program PhyloNet, Program SplitsTree, Program TCS, visualization.
Note: http://bioinfo.uib.es/media/uploaded/bmc-2008-enewick-sub.pdf.