Keyword Clouds

  TreeCloud    Built with TreeCloud & SplitsTree phylogenetic network phylogeny reconstruction from unrooted trees software generation heuristic from quartets abstract network split network circular split system split from distances visualization from splits program splitstree neighbornet split decomposition program t rex median network survey from network distance between networks tree child network time consistent network evaluation from sequences recombination statistical model likelihood from rooted trees from species tree lateral gene transfer duplication loss parsimony np complete hybridization minimum number agreement forest spr distance fpt explicit network approximation polynomial level k phylogenetic network from triplets galled tree from clusters program dendroscope
TreeCloud / Nuage arbore - http://www.treecloud.org - http://poulphunter1.free.fr/ArbreArbore/ NetCloud Built with TreeCloud & SplitsTree phylogenetic network phylogeny reconstruction from unrooted trees heuristic software generation time-consistent network tree-child network distance between networks from network evaluation x survey program T-Rex program SplitsTree split decomposition NeighborNet median network from distances split split network abstract network circular split system from quartets visualization from splits likelihood statistical model recombination from sequences parsimony NP-complete from rooted trees from species tree duplication loss lateral gene transfer FPT minimum number agreement forest SPR distance hybridization approximation explicit network galled tree from triplets level-k phylogenetic network polynomial from clusters program Dendroscope
abstract-network(94) agreement-forest(34) AIC(4) approximation(18) APX-hard(4) ARG(7) bayesian(6) BIC(6) block-realization(1) bootstrap(5) bound(10) branch-and-bound(1) branch-length(6) cactus-graph(2) characterization(17) circular-split-system(16) cluster-containment(7) clustering(3) coalescent(12) compressed-network(3) compression(1) consensus(8) consistency(2) cophylogeny(2) counting(3) database(1) distance-between-networks(34) distinct-cluster-network(2) diversity(5) duplication(41) dynamic-programming(12) enumeration(5) evaluation(29) explicit-network(263) exponential-algorithm(10) flat(2) FPT(37) from-binary-characters(2) from-binets(1) from-clusters(22) from-continuous-characters(1) from-distances(51) from-gene-order(1) from-multilabeled-tree(9) from-multistate-characters(1) from-network(57) from-NGS-data(1) from-quartets(17) from-rooted-trees(152) from-sequences(60) from-species-tree(51) from-splits(14) from-trees(8) from-trinets(5) from-triplets(24) from-unrooted-trees(19) FU-stable-network(1) galled-network(10) galled-tree(46) generation(12) genetically-stable-network(2) haplotype-network(3) haplotyping(1) heuristic(36) HMM(2) hybridization(57) identifiability(4) inapproximability(5) incomplete-lineage-sorting(3) integer-linear-programming(5) isomorphism(3) k-reticulated(1) kernelization(2) labeling(4) lateral-gene-transfer(63) level-k-phylogenetic-network(32) likelihood(23) lineage-sorting(10) loss(24) LST-distance(1) MASN(4) median-network(16) MedianJoining(3) minimal-lateral-network(1) minimum-contradiction(2) minimum-number(37) minimum-spanning-network(2) model-selection(2) mrca-network(1) MSOL(1) mu-distance(2) nearly-stable-network(4) NeighborNet(14) nested-network(3) netting(3) NNI-distance(1) normal-network(10) NP-complete(41) Number-of-vertices(1) optimal-realization(3) outerplanar(1) parsimony(42) partly-reduced-networks(1) pedigree(1) perfect(6) phylogenetic-network(494) phylogeny(479) planar(3) polynomial(85) population-genetics(6) Program-AdmixTools(1) Program-ALE(2) Program-Angst(2) Program-Arlequin(5) Program-ARTNET(1) Program-Beagle(3) Program-BIMLR(2) Program-Bio-PhyloNetwork(4) Program-BMhyd(1) Program-Clustistic(2) Program-CMPT(2) Program-CombineTrees(2) Program-ConsensusNetwork(1) Program-constNJ(1) Program-CycleKiller(3) Program-Dendroscope(16) Program-EEEP(3) Program-FastHN(1) Program-FlatNJ(1) Program-Fylogenetica(1) Program-GalledTree(1) Program-GraphDTL(2) Program-HapBound(1) Program-HGT_simul(1) Program-HiDe(1) Program-HorizStory(2) Program-Hybrid-coal(1) Program-Hybrid-Lambda(3) Program-HybridInterleave(5) Program-HybridNET(2) Program-HybridNumber(3) Program-Hybroscale(6) Program-ILPEACE(1) Program-JML(1) Program-JPrIME-DLTRS(1) Program-LatTrans(5) Program-LEV1ATHAN(2) Program-Lev1Generator(1) Program-Level2(2) Program-LGTnetwork(1) Program-lingpy(1) Program-LNetwork(3) Program-MaafB(2) Program-Marlon(3) Program-MC-Net(1) Program-McKiTscH(1) Program-Mowgli(5) Program-MowgliNNI(2) Program-MPNet(1) Program-MY-CLOSURE(1) Program-Nepal(7) Program-NetGen(3) Program-NetTest(1) Program-NetView(1) Program-Network(5) Program-Notung(1) Program-PADRE(7) Program-Phangorn(2) Program-PhippsNetwork(2) Program-PhyloDAG(2) Program-PhyloNet(16) Program-PhyloNet-HMM(1) Program-PhyloNetwork(2) Program-PhyloNetworks-SNaQ(2) Program-PIRN(7) Program-PopART(1) Program-Prunier(2) Program-Pyramids(3) Program-QNet(4) Program-Quartet(1) Program-Quartet-Decomposition(1) Program-QuartetMethods(1) Program-QuartetNet(2) Program-QuasiDec(1) Program-QuickCass(1) Program-RANGER-DTL(4) Program-RecMin(1) Program-Recodon(3) Program-RecPars(1) Program-Reticlad(2) Program-SAGE(2) Program-SAQ-Net(1) Program-Serial-NetEvolve(1) Program-SHRUB(3) Program-Simplistic(3) Program-Sliding-MinPD(1) Program-SNSA(2) Program-Spectronet(4) Program-SplitsTree(37) Program-SPNet(5) Program-SPRDist(1) Program-SuperQ(1) Program-SylvX(1) Program-T-REX(14) Program-TCS(9) Program-TERA(2) Program-TerminusEst(2) Program-Treeduce(1) Program-TreeFix-DTL(1) Program-TreeMix(1) Program-Treevolve(2) Program-TriLoNet(1) Program-TripNet(2) Program-ultra-Net(1) Program-Ultranet(1) Program-WeakHierarchies(2) Program-Xscape(1) pseudo-polynomial(1) pyramid(8) quasi-median-network(3) realization(4) recombination(29) recombination-detection(4) reconstruction(304) reduced-networks(1) regular-network(8) reticulation-visible-network(5) reticulogram(10) serial-evolutionary-networks(1) simulated-annealing(4) simulation(7) site-consistency(1) software(79) split(31) split-decomposition(13) split-network(59) SPR-distance(16) spread(3) stable-child-network(1) statistical-model(35) statistical-parsimony(3) supernetwork(5) survey(36) tanglegram(1) TBR-distance(1) time-consistent-network(15) tree-child-network(22) tree-containment(16) tree-containment.(1) tree-sibling-network(13) tree-based-network(11) tripartition-distance(10) triplet-distance(3) unicyclic-network(5) uniqueness(9) visualization(32) weak-hierarchy(8) weakly-compatible(3)

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